All cameras autofocus wide open, and then stop down to the selected aperture just before exposure. Plus, the issue is with a lens wide open. Since basically all current autofocus lenses are f/5.6 for faster, or at least they tell the camera that, the limitation really only applies when using slower lenses with teleconverters.
The reason it's mentioned, especially in connection with the 1D X, is that previous 1-series bodies had the ability to AF at the center point with an f/8 combo.