My canon authorized dealer in Dublin when I asked this week about my 7D (which is <1 year old), plus in the ML manual, the following:
"Canon support maintains that any upgrades to the software of the camera not performed by an authorized Canon Repair Facility or installed as directed by Canon, would void the warranty. Thus you should consider it likely that damage occuring to your camera while using Magic Lantern software would not be covered under your Warranty, should Canon challenge the Warranty on that basis. Whether or not their position would hold up legally, has not been tested."
Basically, you use ML at your own risk. I believe most Canon users already knew this to be the case.